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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877650.1_cds_XP_016436536.1_32385
CDS Infomation

[gene=LOC107762675] [db_xref=GeneID:107762675] [protein=IQ domain-containing protein IQM1-like] [protein_id=XP_016436536.1] [location=complement(join(107768..108202,108313..108414,108496..108726,108832..108919,109009..109097,109327..109392,109490..109604,109699..110135))] [gbkey=CDS]
Sequence

ATGGGACTCTCTCTTTCAATACTGTTATCAGCATGGAATGAAATTATAAGGCATAGTTAT
CTTATTTTTCCAGACACAATGGGAAGATCTATTGTCAGATCAGTAAGCATTGAGAGGAAA
AATGGAGAATTATCTTTGAGAACACTCAGTTTCAAAGAAAAAGATGCTAAGAATGTTAGA
AAATCTGATTATTCAGAAGAAAGTCCAAAATACGAGAAACAAAAGCTTAAAACTTGTACT
CCACTTAATAGTTTGGTTATTGACAATGGAAAAATGGATTCAGTACCAAGACTCTCAATT
CCAGAACCCTTTGTGTTCTCTTCTCCGCGACCTGTTACTGAGCTTGACGCTGCTGCGACT
AAGCTCCAGACTGTGTACAAGAGTTATAGGACAAGAAGGAACCTTGCAGATTGTGCTGTA
GTTGTTGAAGAGCTCTGGTGGAAGGCCTTGGATTCTGCAGCTTTAAAACAAAGCTCTATA
TCATTTTTTGATGTCAATAAACATGAAGCTGCGGTGTCACGATGGTCACGTGCCAGAACA
CGAGCTGCTAAGGTAGGCAAAGGTTTGTTGAAGGATGAAAAGGCTCAAAAACTAGCTCTA
CAACATTGGCTGGAAGCTATTGACCCACGTCATCGTTATGGACACAACTTACACTTTTAC
TATGATGTATGGTCCAACAGCAAAAGCACACAACCTTTCTTCTATTGGTTGGATGTGGGT
GATGGCAAAGAAGTAAATCTTGAGCGTTGCCAAAGAGTTGATTTGCAACGTCAATGCATC
AAGTATTTAGGACCTAAAGAAAGAGAAGCCTATGAAGTAATTGTGGAGGATGGCAAGTTG
GTGTATAAGAAAAGTGGGATGCTGTTGAATACAAGAGAAGGATCGAAGTGGATTTTCGTT
CTTAGTACTTCGCGAACTCTTTATGTGGGAATGAAAAAGAAGGGTGTTTTCCAACACTCT
AGTTTTCTATCCGGTGGTGCTACTACAGCAGCTGGTAGATTGGTTGCTCAGGACGGGATT
CTTGAGGCATTATGGCCATACAGTGGTCACTATCTTCCTACGGAAGATAATTTTAAGGAA
TTCATCAGTTTCCTCGAGGAACACCATGTTGATTTGGCTAACGTTAAGAGATGTGCAATA
GATGATGATAGACCTTCATCTAACAAAGACATGGAGAAAACTTTATCACAAACTTGTGAT
GCAGATGTAGCTAAGGACGATGGCCCGGTCAGTGATGTGTCGAAAACAACTGGTGATCAA
GAAAATTTTAGGCCTACCGGTGAAGACCAGACAGAGGCACCAGTTGTTGACTTGACCAAG
CGTTTATCTTGCAAATGGACAAGTGGAGTTGGTCCCCGCATTGGCTGTGTTAGAGACTAT
CCCATTGATCTTCAATCTCAGGCCCTTGAAAAAGTTAATCTTTCTCCGAGGGTTACATTG
TCTCAGCCCAAGAATTGTTATCCAATCCCTTCACCACGACCGAGCCCAAAAATTCGTGTC
TCGCCTAGGCTCGCATTCATGGGACTTCCAAGCCCAAGAGTTTCTGTTACTAGCAGTACT
TAG

Peptide Sequence

PEP ID

XP_016436536.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM1-like [Nicotiana tabacum]
Sequence

MGLSLSILLSAWNEIIRHSYLIFPDTMGRSIVRSVSIERKNGELSLRTLSFKEKDAKNVR
KSDYSEESPKYEKQKLKTCTPLNSLVIDNGKMDSVPRLSIPEPFVFSSPRPVTELDAAAT
KLQTVYKSYRTRRNLADCAVVVEELWWKALDSAALKQSSISFFDVNKHEAAVSRWSRART
RAAKVGKGLLKDEKAQKLALQHWLEAIDPRHRYGHNLHFYYDVWSNSKSTQPFFYWLDVG
DGKEVNLERCQRVDLQRQCIKYLGPKEREAYEVIVEDGKLVYKKSGMLLNTREGSKWIFV
LSTSRTLYVGMKKKGVFQHSSFLSGGATTAAGRLVAQDGILEALWPYSGHYLPTEDNFKE
FISFLEEHHVDLANVKRCAIDDDRPSSNKDMEKTLSQTCDADVAKDDGPVSDVSKTTGDQ
ENFRPTGEDQTEAPVVDLTKRLSCKWTSGVGPRIGCVRDYPIDLQSQALEKVNLSPRVTL
SQPKNCYPIPSPRPSPKIRVSPRLAFMGLPSPRVSVTSST

Transcript Sequence

Gene sequence data has not been registered.